Previously when I have implemented Kalman filters I have used the transformation
$$ \mathbf{A(t)} = \mathcal{L}^{-1} \left( s \mathbf{I} - \mathbf{F} \right) ^{-1} $$
to calculate the state transition matrix $\bf{A}$ from the system dynamics matrix $\bf{F}$.
Where the equation describing the state of the system is
$$ \vec{x_t} = \mathbf{F_t} \vec{x_{t-1}} + \mathbf{B_t} \vec{u_t} + \vec{w_t} $$
and my prediction step calculation is
$$ \vec{x_{k|k-1}} = \mathbf{A} \vec{x_{k-1|k-1}} + B\vec{u_k} $$
For example for simple sinusoidal Kalman filter started from the following equation of motion:
$ \ddot{x} = -\omega^2x $
So my matrix equation of motion was:
$$ \begin{bmatrix} \dot{x} \\ \ddot{x} \\ \end{bmatrix} = \begin{bmatrix} 0 & 1 \\ -\omega^2 & 0 \\ \end{bmatrix} . \begin{bmatrix} x \\ \dot{x} \\ \end{bmatrix} $$
and my system dynamics matrix was
$$ F = \begin{bmatrix} 0 & 1 \\ -\omega^2 & 0 \\ \end{bmatrix} $$
I then performed the transformation $ \mathbf{A(t)} = \mathcal{L}^{-1} \left( s \mathbf{I} - \mathbf{F} \right) ^{-1} $ to get the state transition matrix like so:
$$ A(t) = \begin{bmatrix} \cos(\omega t) & \dfrac{\sin(\omega t)}{\omega} \\ -\omega \sin(\omega t) & \cos(\omega t) \\ \end{bmatrix} $$
Where I then replaced $t$ with my sample time $T_s$ where $T_s = \dfrac{1}{F_s}$ where $F_s$ was my sample frequency.
I then used this to extract my sinusoidal signal.
My question is did I need to perform this transformation? And if I did, why did I have to do so?
I was reading the paper linked here where they attempt the explain the Kalman filter in simple way and they did no such transformation.